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Difference between revisions of "TSS:Hg 92919.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000524237.1:18 ENST00000518384.1:148 BC028600:-192 GQ900924:-192 LF384344:-192 MA619921:-192 ENST00000342228.7:-193 ENST00000520179.5:217 NM_001257181:217 AK314774:217 NM_006749:-221 ENST00000523340.1:226
+
|all_trans=HGNC:10947
 
|chr=chr8
 
|chr=chr8
 
|cpg_percent=0.165
 
|cpg_percent=0.165
Line 22: Line 22:
 
|nearest_refseq=NM_138436
 
|nearest_refseq=NM_138436
 
|nearest_unigene=Hs.655320
 
|nearest_unigene=Hs.655320
|num_trans=12
+
|num_trans=6575
 
|species=human
 
|species=human
 
|start=42541728
 
|start=42541728

Latest revision as of 16:07, 22 July 2021

Basic information about the TSS


TSS ID:hg_92919.1
Species:human
Chr:chr8
TSS Classification:yes
Start:42541728
End:42541733
Strand:-
TSS Score:1
Start of the center position in the TSS region:42541730
End of the center position in the TSS region:42541731



Gene and protein annotation


Transcript_name:ENST00000524237.1
Distance:18
GeneID:6575
HGNC/MGI_ID:HGNC:10947
UniProt_ID:
Gene_name:solute carrier family 20 member 2
Gene_symbol:SLC20A2
Gene_synonyms:Glvr-2 PiT-2 Ram-1
Gene_source:HGNC:10947



Transcript annotation


Transcript_name:ENST00000524237.1
Distance:18
Num_trans:6575
All_trans:HGNC:10947



TATA-Box annotation


Distance to TSS:146
Nearest PromoterID:NM_138436
Entrez ID:114926
Nearest Unigene:Hs.655320
Nearest Refseq:NM_138436
Nearest Ensembl:ENSG00000176209
Gene Name:solute carrier family 20 member 2
Gene Alias:C8orf40
Gene Description:small integral membrane protein 19
Gene Type:protein-coding
CpG%:0.165
GC%:0.835821
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):