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Difference between revisions of "TSS:Hg 94814.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000651667.1:0 ENST00000517869.2:0 ENST00000522865.5:0 ENST00000661778.1:-9 ENST00000662179.1:-9 ENST00000500989.2:-33 BX648371:-33 NR_038447:-41 NR_038446:-41 ENST00000518964.5:-93
+
|all_trans=HGNC:45133
 
|chr=chr8
 
|chr=chr8
 
|cpg_percent=0.005
 
|cpg_percent=0.005
Line 22: Line 22:
 
|nearest_refseq=NR_038446
 
|nearest_refseq=NR_038446
 
|nearest_unigene=Hs.729642
 
|nearest_unigene=Hs.729642
|num_trans=10
+
|num_trans=100130231
 
|species=human
 
|species=human
 
|start=125951143
 
|start=125951143

Latest revision as of 16:48, 22 July 2021

Basic information about the TSS


TSS ID:hg_94814.1
Species:human
Chr:chr8
TSS Classification:yes
Start:125951143
End:125951156
Strand:-
TSS Score:1
Start of the center position in the TSS region:125951149
End of the center position in the TSS region:125951150



Gene and protein annotation


Transcript_name:ENST00000651667.1 ENST00000517869.2 ENST00000522865.5
Distance:0
GeneID:100130231
HGNC/MGI_ID:HGNC:45133
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 861
Gene_symbol:LINC00861
Gene_synonyms:
Gene_source:HGNC:45133



Transcript annotation


Transcript_name:ENST00000651667.1 ENST00000517869.2 ENST00000522865.5
Distance:0
Num_trans:100130231
All_trans:HGNC:45133



TATA-Box annotation


Distance to TSS:47
Nearest PromoterID:NR_038446
Entrez ID:100130231
Nearest Unigene:Hs.729642
Nearest Refseq:NR_038446
Nearest Ensembl:ENSG00000245164
Gene Name:long intergenic non-protein coding RNA 861
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 861
Gene Type:ncRNA
CpG%:0.005
GC%:0.412935
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):