Personal tools

Difference between revisions of "TSS:Hg 96304.1"

From referenceTSS

Jump to: navigation, search
 
Line 4: Line 4:
 
|NCRNA00089=
 
|NCRNA00089=
 
|PCAT12=
 
|PCAT12=
|all_trans=ENST00000421632.2:14 EU741058:14 ENST00000651904.1:23 ENST00000651784.1:33 ENST00000650946.1:52 ENST00000582301.5:-159 ENST00000582072.5:-159 ENST00000584816.5:-159 ENST00000584020.5:-159 ENST00000577551.5:-159 ENST00000584637.5:-159 ENST00000581051.5:-159 GQ495924:-159 GQ495918:-159 GQ495919:-159 GQ495920:-159 GQ495921:-159 GQ495922:-159 GQ495923:-159 ENST00000645313.2:-238 ENST00000455933.7:-239 ENST00000584351.5:-270 ENST00000583719.5:-270 ENST00000580467.5:-270 ENST00000585267.5:-270 ENST00000580576.6:-270 ENST00000428597.6:-270 NR_003529:-270 NR_120536:-270 NR_047542:-270 NR_047541:-270 NR_047540:-270 NR_047539:-270 NR_047538:-270 NR_047537:-270 NR_047536:-270 NR_047535:-270 NR_047534:-270 NR_047533:-270 NR_047532:-270 NR_047543:-270 DQ485454:-270 GQ422823:-270 GQ495926:-270 GQ495925:-270 AB548314:-270 DQ485453:-270 ENST00000652420.1:-283 ENST00000578935.1:401
+
|all_trans=HGNC:34341
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.09
 
|cpg_percent=0.09
Line 26: Line 26:
 
|nearest_refseq=NM_000077
 
|nearest_refseq=NM_000077
 
|nearest_unigene=Hs.512599
 
|nearest_unigene=Hs.512599
|num_trans=49
+
|num_trans=100048912
 
|p15AS=
 
|p15AS=
 
|species=human
 
|species=human

Latest revision as of 17:21, 22 July 2021

Basic information about the TSS


TSS ID:hg_96304.1
Species:human
Chr:chr9
TSS Classification:yes
Start:21995060
End:21995081
Strand:+
TSS Score:1
Start of the center position in the TSS region:21995070
End of the center position in the TSS region:21995071



Gene and protein annotation


Transcript_name:ENST00000421632.2 EU741058
Distance:14
GeneID:100048912
HGNC/MGI_ID:HGNC:34341
UniProt_ID:
Gene_name:CDKN2B antisense RNA 1
Gene_symbol:CDKN2B-AS1
Gene_synonyms:ANRIL CDKN2B-AS NCRNA00089 PCAT12 RP11-145E5.4 p15AS
Gene_source:HGNC:34341



Transcript annotation


Transcript_name:ENST00000421632.2 EU741058
Distance:14
Num_trans:100048912
All_trans:HGNC:34341



TATA-Box annotation


Distance to TSS:253
Nearest PromoterID:NM_001363763
Entrez ID:1029
Nearest Unigene:Hs.512599
Nearest Refseq:NM_000077
Nearest Ensembl:ENSG00000147889
Gene Name:CDKN2B antisense RNA 1
Gene Alias:ARF|CDK4I|CDKN2|CMM2|INK4|INK4A|MLM|MTS-1|MTS1|P14|P14ARF|P16|P16-INK4A|P16INK4|P16INK4A|P19|P19ARF|TP16
Gene Description:cyclin dependent kinase inhibitor 2A
Gene Type:protein-coding
CpG%:0.09
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):