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Difference between revisions of "TSS:Hg 96420.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000425533.1:-12 BC013655:-14 ENST00000644531.1:-15 ENST00000451672.2:-31 LF206414:-68 MA441991:-68 NR_146061:-126 NR_146063:-126 ENST00000635960.1:173
+
|all_trans=HGNC:31420
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_001349118
 
|nearest_refseq=NM_001349118
 
|nearest_unigene=Hs.664395
 
|nearest_unigene=Hs.664395
|num_trans=9
+
|num_trans=100129250
 
|species=human
 
|species=human
 
|start=32552359
 
|start=32552359

Latest revision as of 17:24, 22 July 2021

Basic information about the TSS


TSS ID:hg_96420.1
Species:human
Chr:chr9
TSS Classification:yes
Start:32552359
End:32552370
Strand:+
TSS Score:1
Start of the center position in the TSS region:32552364
End of the center position in the TSS region:32552365



Gene and protein annotation


Transcript_name:ENST00000425533.1
Distance:-12
GeneID:100129250
HGNC/MGI_ID:HGNC:31420
UniProt_ID:A0A1B0GV65
Gene_name:small integral membrane protein 27
Gene_symbol:SMIM27
Gene_synonyms:
Gene_source:HGNC:31420



Transcript annotation


Transcript_name:ENST00000425533.1
Distance:-12
Num_trans:100129250
All_trans:HGNC:31420



TATA-Box annotation


Distance to TSS:131
Nearest PromoterID:NR_146061
Entrez ID:100129250
Nearest Unigene:Hs.664395
Nearest Refseq:NM_001349118
Nearest Ensembl:ENSG00000235453
Gene Name:small integral membrane protein 27
Gene Alias:C9orf133|TOPORS-AS1
Gene Description:small integral membrane protein 27
Gene Type:protein-coding
CpG%:0.1
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):