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Difference between revisions of "TSS:Hg 98090.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK301872:0 BC033037:-14 ENST00000288462.4:25 BC026884:25 ENST00000374165.6:30 NM_152786:30 NM_001278630:30 NM_001278629:30 AK313867:-45
+
|all_trans=HGNC:23570
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 22: Line 22:
 
|nearest_refseq=NM_017443
 
|nearest_refseq=NM_017443
 
|nearest_unigene=Hs.108112
 
|nearest_unigene=Hs.108112
|num_trans=9
+
|num_trans=257169
 
|species=human
 
|species=human
 
|start=113410699
 
|start=113410699

Latest revision as of 18:01, 22 July 2021

Basic information about the TSS


TSS ID:hg_98090.1
Species:human
Chr:chr9
TSS Classification:yes
Start:113410699
End:113410717
Strand:+
TSS Score:1
Start of the center position in the TSS region:113410708
End of the center position in the TSS region:113410709



Gene and protein annotation


Transcript_name:AK301872
Distance:0
GeneID:257169
HGNC/MGI_ID:HGNC:23570
UniProt_ID:B4DX97
Gene_name:chromosome 9 open reading frame 43
Gene_symbol:C9orf43
Gene_synonyms:MGC17358
Gene_source:HGNC:23570



Transcript annotation


Transcript_name:AK301872
Distance:0
Num_trans:257169
All_trans:HGNC:23570



TATA-Box annotation


Distance to TSS:-33
Nearest PromoterID:NM_017443
Entrez ID:54107
Nearest Unigene:Hs.108112
Nearest Refseq:NM_017443
Nearest Ensembl:ENSG00000148229
Gene Name:chromosome 9 open reading frame 43
Gene Alias:CHARAC17|CHRAC17|CHRAC2|YBL1|p17
Gene Description:DNA polymerase epsilon 3, accessory subunit
Gene Type:protein-coding
CpG%:0.115
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):