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Difference between revisions of "TSS:Hg 998.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AB046846:26 ENST00000361221.8:-98 NM_018125:-98 NR_137288:-98 NR_137287:-98 AK311076:99
+
|all_trans=HGNC:25540
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.215
 
|cpg_percent=0.215
Line 22: Line 22:
 
|nearest_refseq=NM_018125
 
|nearest_refseq=NM_018125
 
|nearest_unigene=Hs.443460
 
|nearest_unigene=Hs.443460
|num_trans=6
+
|num_trans=55160
 
|species=human
 
|species=human
 
|start=17539795
 
|start=17539795

Latest revision as of 18:38, 22 July 2021

Basic information about the TSS


TSS ID:hg_998.1
Species:human
Chr:chr1
TSS Classification:yes
Start:17539795
End:17539809
Strand:+
TSS Score:1
Start of the center position in the TSS region:17539802
End of the center position in the TSS region:17539803



Gene and protein annotation


Transcript_name:AB046846
Distance:26
GeneID:55160
HGNC/MGI_ID:HGNC:25540
UniProt_ID:
Gene_name:Rho guanine nucleotide exchange factor 10 like
Gene_symbol:ARHGEF10L
Gene_synonyms:FLJ10521 KIAA1626
Gene_source:HGNC:25540



Transcript annotation


Transcript_name:AB046846
Distance:26
Num_trans:55160
All_trans:HGNC:25540



TATA-Box annotation


Distance to TSS:104
Nearest PromoterID:NR_137287
Entrez ID:55160
Nearest Unigene:Hs.443460
Nearest Refseq:NM_018125
Nearest Ensembl:ENSG00000074964
Gene Name:Rho guanine nucleotide exchange factor 10 like
Gene Alias:GrinchGEF
Gene Description:Rho guanine nucleotide exchange factor 10 like
Gene Type:protein-coding
CpG%:0.215
GC%:0.880597
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):