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Difference between revisions of "TSS:Mm 100008.1"

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Line 2: Line 2:
 
|3200002M13Rik=
 
|3200002M13Rik=
 
|Raig3=
 
|Raig3=
|all_trans=BC031439:0 NM_147217:-24 AK014308:156 ENSMUST00000136785.1:-174 ENSMUST00000021071.13:-204 ENSMUST00000053361.11:-212 AK128950:-212 ENSMUST00000142262.1:244
+
|all_trans=MGI:1917605
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 24: Line 24:
 
|nearest_refseq=NM_147217
 
|nearest_refseq=NM_147217
 
|nearest_unigene=Mm.242413
 
|nearest_unigene=Mm.242413
|num_trans=8
+
|num_trans=70355
 
|species=mouse
 
|species=mouse
 
|start=114852053
 
|start=114852053

Latest revision as of 10:29, 26 July 2021

Basic information about the TSS


TSS ID:mm_100008.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:114852053
End:114852075
Strand:+
TSS Score:1
Start of the center position in the TSS region:114852064
End of the center position in the TSS region:114852065



Gene and protein annotation


Transcript_name:BC031439
Distance:0
GeneID:70355
HGNC/MGI_ID:MGI:1917605
UniProt_ID:
Gene_name:G protein-coupled receptor, family C, group 5, member C
Gene_symbol:Gprc5c
Gene_synonyms:1110028I06Rik 3200002M13Rik
Gene_source:MGI:1917605



Transcript annotation


Transcript_name:BC031439
Distance:0
Num_trans:70355
All_trans:MGI:1917605



TATA-Box annotation


Distance to TSS:34
Nearest PromoterID:NM_147217
Entrez ID:70355
Nearest Unigene:Mm.242413
Nearest Refseq:NM_147217
Nearest Ensembl:ENSMUSG00000051043
Gene Name:G protein-coupled receptor, family C, group 5, member C
Gene Alias:1110028I06Rik|3200002M13Rik|Raig3
Gene Description:G protein-coupled receptor, family C, group 5, member C
Gene Type:protein-coding
CpG%:0.075
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):