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Difference between revisions of "TSS:Mm 100017.1"

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Line 6: Line 6:
 
|MMAC8=
 
|MMAC8=
 
|Pigr4=
 
|Pigr4=
|all_trans=AB095675:0 ENSMUST00000153245.1:68 AB091765:77 AB091766:93 AB065156:96 BC139296:-111 BC139297:-111 AK053160:128 AY457054:139 ENSMUST00000106582.8:-175 ENSMUST00000045151.5:-175 NM_170758:-175 NM_001347654:-175 NM_001359812:-175 AK045869:-175
+
|all_trans=MGI:2443411
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 29: Line 29:
 
|nearest_refseq=NM_170758
 
|nearest_refseq=NM_170758
 
|nearest_unigene=Mm.294439
 
|nearest_unigene=Mm.294439
|num_trans=15
+
|num_trans=217303
 
|species=mouse
 
|species=mouse
 
|start=114890215
 
|start=114890215

Latest revision as of 10:29, 26 July 2021

Basic information about the TSS


TSS ID:mm_100017.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:114890215
End:114890226
Strand:+
TSS Score:1
Start of the center position in the TSS region:114890220
End of the center position in the TSS region:114890221



Gene and protein annotation


Transcript_name:AB095675
Distance:0
GeneID:217303
HGNC/MGI_ID:MGI:2443411
UniProt_ID:
Gene_name:CD300A molecule
Gene_symbol:Cd300a
Gene_synonyms:B230315M08Rik Clm8 LMIR1 MAIR-I MMAC8 Pigr4
Gene_source:MGI:2443411



Transcript annotation


Transcript_name:AB095675
Distance:0
Num_trans:217303
All_trans:MGI:2443411



TATA-Box annotation


Distance to TSS:180
Nearest PromoterID:NM_170758
Entrez ID:217303
Nearest Unigene:Mm.294439
Nearest Refseq:NM_170758
Nearest Ensembl:ENSMUSG00000034652
Gene Name:CD300A molecule
Gene Alias:B230315M08Rik|Clm8|LMIR1|MAIR-1|MAIR-I|MAIR-Ia|MMAC8|Pigr4|mcpir1
Gene Description:CD300A molecule
Gene Type:protein-coding
CpG%:0.05
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):