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Difference between revisions of "TSS:Mm 100076.1"

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Line 3: Line 3:
 
|MCT 6=
 
|MCT 6=
 
|MCT5=
 
|MCT5=
|all_trans=ENSMUST00000125251.7:-147 BC172170:-150 ENSMUST00000153466.1:-205 ENSMUST00000092445.11:-233 ENSMUST00000106532.3:-237 NM_001359606:-237 NM_001359608:-237 AK079757:-237 NM_001080934:-238
+
|all_trans=MGI:2443515
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.03
 
|cpg_percent=0.03
Line 25: Line 25:
 
|nearest_refseq=NM_001080934
 
|nearest_refseq=NM_001080934
 
|nearest_unigene=Mm.25773
 
|nearest_unigene=Mm.25773
|num_trans=9
+
|num_trans=217316
 
|species=mouse
 
|species=mouse
 
|start=115462710
 
|start=115462710

Latest revision as of 10:30, 26 July 2021

Basic information about the TSS


TSS ID:mm_100076.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115462710
End:115462731
Strand:+
TSS Score:1
Start of the center position in the TSS region:115462720
End of the center position in the TSS region:115462721



Gene and protein annotation


Transcript_name:ENSMUST00000125251.7
Distance:-147
GeneID:217316
HGNC/MGI_ID:MGI:2443515
UniProt_ID:
Gene_name:solute carrier family 16 (monocarboxylic acid transporters), member 5
Gene_symbol:Slc16a5
Gene_synonyms:A130015N09Rik MCT5
Gene_source:MGI:2443515



Transcript annotation


Transcript_name:ENSMUST00000125251.7
Distance:-147
Num_trans:217316
All_trans:MGI:2443515



TATA-Box annotation


Distance to TSS:247
Nearest PromoterID:NM_001359606
Entrez ID:217316
Nearest Unigene:Mm.25773
Nearest Refseq:NM_001080934
Nearest Ensembl:ENSMUSG00000045775
Gene Name:solute carrier family 16 (monocarboxylic acid transporters), member 5
Gene Alias:A130015N09Rik|MCT 5|MCT 6|MCT5
Gene Description:solute carrier family 16 (monocarboxylic acid transporters), member 5
Gene Type:protein-coding
CpG%:0.03
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):