Personal tools

Difference between revisions of "TSS:Mm 100086.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|BC023126=
 
|BC023126=
|all_trans=AK042345:13 ENSMUST00000126533.1:-61 AK146249:-86 ENSMUST00000136985.7:-105 ENSMUST00000140181.1:125 BC023126:-126 ENSMUST00000035240.6:-136 NM_177778:-136 NM_001361594:-136
+
|all_trans=MGI:2679719
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 23: Line 23:
 
|nearest_refseq=NM_177778
 
|nearest_refseq=NM_177778
 
|nearest_unigene=Mm.38019
 
|nearest_unigene=Mm.38019
|num_trans=9
+
|num_trans=276905
 
|species=mouse
 
|species=mouse
 
|start=115475802
 
|start=115475802

Latest revision as of 10:30, 26 July 2021

Basic information about the TSS


TSS ID:mm_100086.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115475802
End:115475829
Strand:+
TSS Score:1
Start of the center position in the TSS region:115475815
End of the center position in the TSS region:115475816



Gene and protein annotation


Transcript_name:AK042345
Distance:13
GeneID:276905
HGNC/MGI_ID:MGI:2679719
UniProt_ID:
Gene_name:armadillo repeat containing 7
Gene_symbol:Armc7
Gene_synonyms:
Gene_source:MGI:2679719



Transcript annotation


Transcript_name:AK042345
Distance:13
Num_trans:276905
All_trans:MGI:2679719



TATA-Box annotation


Distance to TSS:149
Nearest PromoterID:NM_001361594
Entrez ID:276905
Nearest Unigene:Mm.38019
Nearest Refseq:NM_177778
Nearest Ensembl:ENSMUSG00000057219
Gene Name:armadillo repeat containing 7
Gene Alias:A630084C13|BC023126
Gene Description:armadillo repeat containing 7
Gene Type:protein-coding
CpG%:0.06
GC%:0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):