Personal tools

Difference between revisions of "TSS:Mm 100095.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Rpms7=
 
|Rpms7=
|all_trans=AK162024:0 AK009251:7 AK012225:-19 BC049636:-19 NM_025305:-30 AK131937:-30 AB341708:-200 ENSMUST00000058109.8:-245 LF198983:-246 MA434560:-246
+
|all_trans=MGI:1354367
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 23: Line 23:
 
|nearest_refseq=NM_025305
 
|nearest_refseq=NM_025305
 
|nearest_unigene=Mm.193040
 
|nearest_unigene=Mm.193040
|num_trans=10
+
|num_trans=50529
 
|species=mouse
 
|species=mouse
 
|start=115604169
 
|start=115604169

Latest revision as of 10:30, 26 July 2021

Basic information about the TSS


TSS ID:mm_100095.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115604169
End:115604180
Strand:+
TSS Score:1
Start of the center position in the TSS region:115604174
End of the center position in the TSS region:115604175



Gene and protein annotation


Transcript_name:AK162024
Distance:0
GeneID:50529
HGNC/MGI_ID:MGI:1354367
UniProt_ID:
Gene_name:mitchondrial ribosomal protein S7
Gene_symbol:Mrps7
Gene_synonyms:MRP-S7 Rpms7
Gene_source:MGI:1354367



Transcript annotation


Transcript_name:AK162024
Distance:0
Num_trans:50529
All_trans:MGI:1354367



TATA-Box annotation


Distance to TSS:35
Nearest PromoterID:NM_025305
Entrez ID:50529
Nearest Unigene:Mm.193040
Nearest Refseq:NM_025305
Nearest Ensembl:ENSMUSG00000046756
Gene Name:mitchondrial ribosomal protein S7
Gene Alias:MRP-S7|Rpms7|S7mt
Gene Description:mitchondrial ribosomal protein S7
Gene Type:protein-coding
CpG%:0.11
GC%:0.711443
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):