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Difference between revisions of "TSS:Mm 100119.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000167507.2:-10 BC051090:-10
+
|all_trans=MGI:2685534
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 22: Line 22:
 
|nearest_refseq=NM_183259
 
|nearest_refseq=NM_183259
 
|nearest_unigene=Mm.275740
 
|nearest_unigene=Mm.275740
|num_trans=2
+
|num_trans=217328
 
|species=mouse
 
|species=mouse
 
|start=115887610
 
|start=115887610

Latest revision as of 10:31, 26 July 2021

Basic information about the TSS


TSS ID:mm_100119.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115887610
End:115887651
Strand:+
TSS Score:1
Start of the center position in the TSS region:115887630
End of the center position in the TSS region:115887631



Gene and protein annotation


Transcript_name:ENSMUST00000167507.2 BC051090
Distance:-10
GeneID:217328
HGNC/MGI_ID:MGI:2685534
UniProt_ID:F6Y6G7 Q80X40
Gene_name:myosin XVB
Gene_symbol:Myo15b
Gene_synonyms:E330039G21Rik LOC217328 LOC380737
Gene_source:MGI:2685534



Transcript annotation


Transcript_name:ENSMUST00000167507.2 BC051090
Distance:-10
Num_trans:217328
All_trans:MGI:2685534



TATA-Box annotation


Distance to TSS:-12508
Nearest PromoterID:NM_183259
Entrez ID:66528
Nearest Unigene:Mm.275740
Nearest Refseq:NM_183259
Nearest Ensembl:ENSMUSG00000048442
Gene Name:myosin XVB
Gene Alias:2210020M01Rik
Gene Description:small integral membrane protein 5
Gene Type:protein-coding
CpG%:0.025
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):