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Difference between revisions of "TSS:Mm 100126.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC038330:36 ENSMUST00000132961.1:-264 NM_001162998:-264 AK003745:-264 AK156823:-321
+
|all_trans=MGI:1915778
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0
 
|cpg_percent=0
Line 22: Line 22:
 
|nearest_refseq=NM_001162998
 
|nearest_refseq=NM_001162998
 
|nearest_unigene=Mm.441893
 
|nearest_unigene=Mm.441893
|num_trans=5
+
|num_trans=68528
 
|species=mouse
 
|species=mouse
 
|start=115912280
 
|start=115912280

Latest revision as of 10:31, 26 July 2021

Basic information about the TSS


TSS ID:mm_100126.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115912280
End:115912303
Strand:+
TSS Score:1
Start of the center position in the TSS region:115912291
End of the center position in the TSS region:115912292



Gene and protein annotation


Transcript_name:BC038330
Distance:36
GeneID:68528
HGNC/MGI_ID:MGI:1915778
UniProt_ID:
Gene_name:small integral membrane protein 6
Gene_symbol:Smim6
Gene_synonyms:1110017F19Rik ELN endoregulin
Gene_source:MGI:1915778



Transcript annotation


Transcript_name:BC038330
Distance:36
Num_trans:68528
All_trans:MGI:1915778



TATA-Box annotation


Distance to TSS:275
Nearest PromoterID:NM_001162998
Entrez ID:68528
Nearest Unigene:Mm.441893
Nearest Refseq:NM_001162998
Nearest Ensembl:ENSMUSG00000075420
Gene Name:small integral membrane protein 6
Gene Alias:1110017F19Rik|Eln
Gene Description:small integral membrane protein 6
Gene Type:protein-coding
CpG%:0
GC%:0.557214
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):