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Difference between revisions of "TSS:Mm 100185.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|OTTMUSG00000003947=
 
|OTTMUSG00000003947=
|all_trans=ENSMUST00000156088.1:-358 ENSMUST00000116318.2:-406 NM_001163318:-406 DQ390337:-406
+
|all_trans=MGI:3649529
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 23: Line 23:
 
|nearest_refseq=NM_001163318
 
|nearest_refseq=NM_001163318
 
|nearest_unigene=Mm.390349
 
|nearest_unigene=Mm.390349
|num_trans=4
+
|num_trans=100038570
 
|species=mouse
 
|species=mouse
 
|start=116657513
 
|start=116657513

Latest revision as of 10:32, 26 July 2021

Basic information about the TSS


TSS ID:mm_100185.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:116657513
End:116657536
Strand:+
TSS Score:1
Start of the center position in the TSS region:116657524
End of the center position in the TSS region:116657525



Gene and protein annotation


Transcript_name:ENSMUST00000156088.1
Distance:-358
GeneID:100038570
HGNC/MGI_ID:MGI:3649529
UniProt_ID:
Gene_name:photoreceptor disc component
Gene_symbol:Prcd
Gene_synonyms:Gm11744
Gene_source:MGI:3649529



Transcript annotation


Transcript_name:ENSMUST00000156088.1
Distance:-358
Num_trans:100038570
All_trans:MGI:3649529



TATA-Box annotation


Distance to TSS:417
Nearest PromoterID:NM_001163318
Entrez ID:100038570
Nearest Unigene:Mm.390349
Nearest Refseq:NM_001163318
Nearest Ensembl:ENSMUSG00000075410
Gene Name:photoreceptor disc component
Gene Alias:Gm11744
Gene Description:photoreceptor disc component
Gene Type:protein-coding
CpG%:0.02
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):