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Difference between revisions of "TSS:Mm 100192.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AF118272:7 ENSMUST00000132056.7:-60 AF118273:-60 ENSMUST00000156293.7:-62 NR_003364:-62 AK158468:84 AK156340:96 ENSMUST00000145570.7:114 AF118847:115
+
|all_trans=MGI:3039625
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NR_003364
 
|nearest_refseq=NR_003364
 
|nearest_unigene=Mm.100084
 
|nearest_unigene=Mm.100084
|num_trans=9
+
|num_trans=193217
 
|species=mouse
 
|species=mouse
 
|start=116752228
 
|start=116752228

Latest revision as of 10:33, 26 July 2021

Basic information about the TSS


TSS ID:mm_100192.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:116752228
End:116752235
Strand:+
TSS Score:1
Start of the center position in the TSS region:116752231
End of the center position in the TSS region:116752232



Gene and protein annotation


Transcript_name:AF118272
Distance:7
GeneID:193217
HGNC/MGI_ID:MGI:3039625
UniProt_ID:
Gene_name:cDNA sequence BC018473
Gene_symbol:BC018473
Gene_synonyms:
Gene_source:MGI:3039625



Transcript annotation


Transcript_name:AF118272
Distance:7
Num_trans:193217
All_trans:MGI:3039625



TATA-Box annotation


Distance to TSS:65
Nearest PromoterID:NR_003364
Entrez ID:193217
Nearest Unigene:Mm.100084
Nearest Refseq:NR_003364
Nearest Ensembl:
Gene Name:cDNA sequence BC018473
Gene Alias:-
Gene Description:cDNA sequence BC018473
Gene Type:ncRNA
CpG%:0.02
GC%:0.502488
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):