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Difference between revisions of "TSS:Mm 100205.1"

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Line 2: Line 2:
 
|1500035B17Rik=
 
|1500035B17Rik=
 
|4933424L15Rik=
 
|4933424L15Rik=
|all_trans=ENSMUST00000132593.7:-33 ENSMUST00000140869.1:-33 ENSMUST00000176799.7:-35 AK160133:-35 AK003450:-38 BC026936:-108 ENSMUST00000176765.1:-123 ENSMUST00000128784.1:-147 AK168267:-147 ENSMUST00000175930.7:-153 AK016897:-153 AK135294:-153 NM_028865:-193 ENSMUST00000106370.9:-430
+
|all_trans=MGI:1921569
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 24: Line 24:
 
|nearest_refseq=NM_028865
 
|nearest_refseq=NM_028865
 
|nearest_unigene=Mm.429312
 
|nearest_unigene=Mm.429312
|num_trans=14
+
|num_trans=74319
 
|species=mouse
 
|species=mouse
 
|start=116843707
 
|start=116843707

Latest revision as of 10:33, 26 July 2021

Basic information about the TSS


TSS ID:mm_100205.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:116843707
End:116843730
Strand:+
TSS Score:1
Start of the center position in the TSS region:116843718
End of the center position in the TSS region:116843719



Gene and protein annotation


Transcript_name:ENSMUST00000132593.7 ENSMUST00000140869.1
Distance:-33
GeneID:74319
HGNC/MGI_ID:MGI:1921569
UniProt_ID:H3BKB2 H3BKP4
Gene_name:methyltransferase like 23
Gene_symbol:Mettl23
Gene_synonyms:1110005A03Rik 1500035B17Rik 4933424L15Rik
Gene_source:MGI:1921569



Transcript annotation


Transcript_name:ENSMUST00000132593.7 ENSMUST00000140869.1
Distance:-33
Num_trans:74319
All_trans:MGI:1921569



TATA-Box annotation


Distance to TSS:204
Nearest PromoterID:NM_028865
Entrez ID:74319
Nearest Unigene:Mm.429312
Nearest Refseq:NM_028865
Nearest Ensembl:ENSMUSG00000090266
Gene Name:methyltransferase like 23
Gene Alias:1110005A03Rik|1500035B17Rik|4933424L15Rik
Gene Description:methyltransferase like 23
Gene Type:protein-coding
CpG%:0.115
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):