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Difference between revisions of "TSS:Mm 10022.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=D83528:-65 BC012702:-167 AK144694:-174 ENSMUST00000085573.11:-184 AK141097:-184 D78141:-189 NM_011633:-224
+
|all_trans=MGI:107548
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_011633
 
|nearest_refseq=NM_011633
 
|nearest_unigene=Mm.380491
 
|nearest_unigene=Mm.380491
|num_trans=7
+
|num_trans=22033
 
|species=mouse
 
|species=mouse
 
|start=192092366
 
|start=192092366

Latest revision as of 10:33, 26 July 2021

Basic information about the TSS


TSS ID:mm_10022.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:192092366
End:192092375
Strand:-
TSS Score:1
Start of the center position in the TSS region:192092370
End of the center position in the TSS region:192092371



Gene and protein annotation


Transcript_name:D83528
Distance:-65
GeneID:22033
HGNC/MGI_ID:MGI:107548
UniProt_ID:
Gene_name:TNF receptor-associated factor 5
Gene_symbol:Traf5
Gene_synonyms:
Gene_source:MGI:107548



Transcript annotation


Transcript_name:D83528
Distance:-65
Num_trans:22033
All_trans:MGI:107548



TATA-Box annotation


Distance to TSS:228
Nearest PromoterID:NM_011633
Entrez ID:22033
Nearest Unigene:Mm.380491
Nearest Refseq:NM_011633
Nearest Ensembl:
Gene Name:TNF receptor-associated factor 5
Gene Alias:-
Gene Description:TNF receptor-associated factor 5
Gene Type:protein-coding
CpG%:0.1
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):