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Difference between revisions of "TSS:Mm 100225.1"

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Line 2: Line 2:
 
|2810012L19Rik=
 
|2810012L19Rik=
 
|Naa-35=
 
|Naa-35=
|all_trans=ENSMUST00000103026.9:0 ENSMUST00000090433.5:0 ENSMUST00000146585.1:0 BC086620:0 AK004818:0 BC055849:0 ENSMUST00000021177.14:-24 ENSMUST00000127090.7:-28 NM_001166506:-28 NM_001166507:-28 NM_028777:-28 NR_029459:-28 AK047396:-28
+
|all_trans=MGI:1921386
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.155
 
|cpg_percent=0.155
Line 24: Line 24:
 
|nearest_refseq=NM_028777
 
|nearest_refseq=NM_028777
 
|nearest_unigene=Mm.272312
 
|nearest_unigene=Mm.272312
|num_trans=13
+
|num_trans=74136
 
|species=mouse
 
|species=mouse
 
|start=117115195
 
|start=117115195

Latest revision as of 10:33, 26 July 2021

Basic information about the TSS


TSS ID:mm_100225.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117115195
End:117115257
Strand:+
TSS Score:1
Start of the center position in the TSS region:117115226
End of the center position in the TSS region:117115227



Gene and protein annotation


Transcript_name:ENSMUST00000103026.9 ENSMUST00000090433.5 ENSMUST00000146585.1 BC086620 AK004818 BC055849
Distance:0
GeneID:74136
HGNC/MGI_ID:MGI:1921386
UniProt_ID:A8Y5H7
Gene_name:SEC14-like lipid binding 1
Gene_symbol:Sec14l1
Gene_synonyms:1200017E04Rik 2810012L19Rik
Gene_source:MGI:1921386



Transcript annotation


Transcript_name:ENSMUST00000103026.9 ENSMUST00000090433.5 ENSMUST00000146585.1 BC086620 AK004818 BC055849
Distance:0
Num_trans:74136
All_trans:MGI:1921386



TATA-Box annotation


Distance to TSS:58
Nearest PromoterID:NR_029459
Entrez ID:74136
Nearest Unigene:Mm.272312
Nearest Refseq:NM_028777
Nearest Ensembl:ENSMUSG00000020823
Gene Name:SEC14-like lipid binding 1
Gene Alias:1200017E04Rik|2810012L19Rik|Naa-35
Gene Description:SEC14-like lipid binding 1
Gene Type:protein-coding
CpG%:0.155
GC%:0.776119
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):