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Difference between revisions of "TSS:Mm 100272.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|EVER1=
 
|EVER1=
|all_trans=AK137381:170
+
|all_trans=MGI:2443265
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 23: Line 23:
 
|nearest_refseq=NM_145439
 
|nearest_refseq=NM_145439
 
|nearest_unigene=Mm.286963
 
|nearest_unigene=Mm.286963
|num_trans=1
+
|num_trans=217351
 
|species=mouse
 
|species=mouse
 
|start=117762215
 
|start=117762215

Latest revision as of 10:34, 26 July 2021

Basic information about the TSS


TSS ID:mm_100272.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:117762215
End:117762220
Strand:+
TSS Score:1
Start of the center position in the TSS region:117762217
End of the center position in the TSS region:117762218



Gene and protein annotation


Transcript_name:AK137381
Distance:170
GeneID:217351
HGNC/MGI_ID:MGI:2443265
UniProt_ID:
Gene_name:trinucleotide repeat containing 6C
Gene_symbol:Tnrc6c
Gene_synonyms:9930033H14Rik
Gene_source:MGI:2443265



Transcript annotation


Transcript_name:AK137381
Distance:170
Num_trans:217351
All_trans:MGI:2443265



TATA-Box annotation


Distance to TSS:17430
Nearest PromoterID:NR_154387
Entrez ID:217353
Nearest Unigene:Mm.286963
Nearest Refseq:NM_145439
Nearest Ensembl:ENSMUSG00000025572
Gene Name:trinucleotide repeat containing 6C
Gene Alias:D11Ertd204e|EVER1
Gene Description:transmembrane channel-like gene family 6
Gene Type:protein-coding
CpG%:0.025
GC%:0.363184
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):