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Difference between revisions of "TSS:Mm 100275.1"

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{{TSSDetail
 
{{TSSDetail
 
|Ever2=
 
|Ever2=
|all_trans=ENSMUST00000127080.7:-37 ENSMUST00000050874.13:167 NM_001195089:167 NM_001195090:167 NM_181856:167 ENSMUST00000106334.8:185 AK171772:185 AK156764:207 ENSMUST00000117781.7:255 AY236501:255
+
|all_trans=MGI:2669037
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 24: Line 24:
 
|nearest_refseq=NM_181856
 
|nearest_refseq=NM_181856
 
|nearest_unigene=Mm.116675
 
|nearest_unigene=Mm.116675
|num_trans=10
+
|num_trans=217356
 
|species=mouse
 
|species=mouse
 
|start=117782112
 
|start=117782112

Latest revision as of 10:34, 26 July 2021

Basic information about the TSS


TSS ID:mm_100275.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117782112
End:117782130
Strand:+
TSS Score:1
Start of the center position in the TSS region:117782121
End of the center position in the TSS region:117782122



Gene and protein annotation


Transcript_name:ENSMUST00000127080.7
Distance:-37
GeneID:217356
HGNC/MGI_ID:MGI:2669037
UniProt_ID:B1ATB9
Gene_name:transmembrane channel-like gene family 8
Gene_symbol:Tmc8
Gene_synonyms:EVIN2 Ever2
Gene_source:MGI:2669037



Transcript annotation


Transcript_name:ENSMUST00000127080.7
Distance:-37
Num_trans:217356
All_trans:MGI:2669037



TATA-Box annotation


Distance to TSS:-176
Nearest PromoterID:NM_001195089
Entrez ID:217356
Nearest Unigene:Mm.116675
Nearest Refseq:NM_181856
Nearest Ensembl:ENSMUSG00000050106
Gene Name:transmembrane channel-like gene family 8
Gene Alias:EVIN2|Ever2|mFLJ00400
Gene Description:transmembrane channel-like gene family 8
Gene Type:protein-coding
CpG%:0.06
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):