Difference between revisions of "TSS:Mm 100284.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1328324 MGI:5313155 |
|cellugyrin= | |cellugyrin= | ||
|chr=chr11 | |chr=chr11 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_009304 | |nearest_refseq=NM_009304 | ||
|nearest_unigene=Mm.468228 | |nearest_unigene=Mm.468228 | ||
| − | |num_trans= | + | |num_trans=20973 |
|species=mouse | |species=mouse | ||
|start=117809653 | |start=117809653 | ||
|start_of_center_position=117809669 | |start_of_center_position=117809669 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000026649.13 ENSMUST00000132298.1 ENSMUST00000177131.7 | + | |transcript_name=ENSMUST00000026649.13 ENSMUST00000132298.1 ENSMUST00000177131.7 AK150234 AK170681 AF151985 BC004829 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100284.1 | |tss_id=mm_100284.1 | ||
Latest revision as of 10:35, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 117809669 |
|---|---|
| End of the center position in the TSS region: | 117809670 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000026649.13 ENSMUST00000132298.1 ENSMUST00000177131.7 AK150234 AK170681 AF151985 BC004829 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20973 |
| All_trans: | MGI:1328324 MGI:5313155 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_009304 |
| Entrez ID: | 20973 |
| Nearest Unigene: | Mm.468228 |
| Nearest Refseq: | NM_009304 |
| Nearest Ensembl: | ENSMUSG00000048277 |
| Gene Name: | predicted gene 20708; synaptogyrin 2 |
| Gene Alias: | Clast2|cellugyrin |
| Gene Description: | synaptogyrin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
