Personal tools

Difference between revisions of "TSS:Mm 100285.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000177241.1:0 ENSMUST00000120928.1:0 AK157343:0 AJ002307:0 AF364049:-1 BC004829:-4 ENSMUST00000177131.7:-5 AF151985:-7 ENSMUST00000175737.1:9 AK089424:-18 AK170681:-19 ENSMUST00000026649.13:-20 ENSMUST00000132298.1:-20 AK150234:-20 AK004030:-20 NM_009304:-21 AK185198:37
+
|all_trans=MGI:1328324
 
|cellugyrin=
 
|cellugyrin=
 
|chr=chr11
 
|chr=chr11
Line 23: Line 23:
 
|nearest_refseq=NM_009304
 
|nearest_refseq=NM_009304
 
|nearest_unigene=Mm.468228
 
|nearest_unigene=Mm.468228
|num_trans=17
+
|num_trans=20973
 
|species=mouse
 
|species=mouse
 
|start=117809687
 
|start=117809687

Latest revision as of 10:35, 26 July 2021

Basic information about the TSS


TSS ID:mm_100285.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117809687
End:117809703
Strand:+
TSS Score:1
Start of the center position in the TSS region:117809695
End of the center position in the TSS region:117809696



Gene and protein annotation


Transcript_name:ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307
Distance:0
GeneID:20973
HGNC/MGI_ID:MGI:1328324
UniProt_ID:B0QZP8 H3BJY1
Gene_name:synaptogyrin 2
Gene_symbol:Syngr2
Gene_synonyms:Clast2 cellugyrin
Gene_source:MGI:1328324



Transcript annotation


Transcript_name:ENSMUST00000177241.1 ENSMUST00000120928.1 AK157343 AJ002307
Distance:0
Num_trans:20973
All_trans:MGI:1328324



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_009304
Entrez ID:20973
Nearest Unigene:Mm.468228
Nearest Refseq:NM_009304
Nearest Ensembl:ENSMUSG00000048277
Gene Name:synaptogyrin 2
Gene Alias:Clast2|cellugyrin
Gene Description:synaptogyrin 2
Gene Type:protein-coding
CpG%:0.145
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):