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Difference between revisions of "TSS:Mm 100286.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK216027:114 AK179476:-160 AK217453:-160 AK182581:218 AK206414:218 AK207465:218 AK209714:218 AK214806:218 AK215405:218 AK218231:218 ENSMUST00000176936.1:-302 AK208001:370 AK219628:370
+
|all_trans=MGI:1328324
 
|cellugyrin=
 
|cellugyrin=
 
|chr=chr11
 
|chr=chr11
Line 23: Line 23:
 
|nearest_refseq=NM_009304
 
|nearest_refseq=NM_009304
 
|nearest_unigene=Mm.468228
 
|nearest_unigene=Mm.468228
|num_trans=13
+
|num_trans=20973
 
|species=mouse
 
|species=mouse
 
|start=117813292
 
|start=117813292

Latest revision as of 10:35, 26 July 2021

Basic information about the TSS


TSS ID:mm_100286.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:117813292
End:117813303
Strand:+
TSS Score:1
Start of the center position in the TSS region:117813297
End of the center position in the TSS region:117813298



Gene and protein annotation


Transcript_name:AK216027
Distance:114
GeneID:20973
HGNC/MGI_ID:MGI:1328324
UniProt_ID:
Gene_name:synaptogyrin 2
Gene_symbol:Syngr2
Gene_synonyms:Clast2 cellugyrin
Gene_source:MGI:1328324



Transcript annotation


Transcript_name:AK216027
Distance:114
Num_trans:20973
All_trans:MGI:1328324



TATA-Box annotation


Distance to TSS:3631
Nearest PromoterID:NM_009304
Entrez ID:20973
Nearest Unigene:Mm.468228
Nearest Refseq:NM_009304
Nearest Ensembl:ENSMUSG00000048277
Gene Name:synaptogyrin 2
Gene Alias:Clast2|cellugyrin
Gene Description:synaptogyrin 2
Gene Type:protein-coding
CpG%:0.02
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):