Personal tools

Difference between revisions of "TSS:Mm 10030.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|C730034D20Rik=
 
|C730034D20Rik=
 
|E130101E15Rik=
 
|E130101E15Rik=
|all_trans=ENSMUST00000192128.5:0 BC020065:0 AK164939:-72 ENSMUST00000110849.9:-77 ENSMUST00000194395.5:-77 AK135612:-77 AK155440:-77 ENSMUST00000193322.1:-91 ENSMUST00000192491.5:-93 AK040839:-93 AK050287:-97 ENSMUST00000192158.5:-98 ENSMUST00000194493.1:-102 ENSMUST00000073279.12:-107 NM_001290282:-107 NM_001346740:-107 NM_001290278:-107 NM_144814:-107 NM_001290280:-107 NM_001290279:-107 BC057141:108 AK203210:128 ENSMUST00000192866.5:-129 BC138938:135 BC138939:135 BC145469:135 ENSMUST00000193144.1:235
+
|all_trans=MGI:2441920
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 24: Line 24:
 
|nearest_refseq=NM_144814
 
|nearest_refseq=NM_144814
 
|nearest_unigene=Mm.207457
 
|nearest_unigene=Mm.207457
|num_trans=27
+
|num_trans=214742
 
|species=mouse
 
|species=mouse
 
|start=192137894
 
|start=192137894

Latest revision as of 10:35, 26 July 2021

Basic information about the TSS


TSS ID:mm_10030.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:192137894
End:192137933
Strand:-
TSS Score:1
Start of the center position in the TSS region:192137913
End of the center position in the TSS region:192137914



Gene and protein annotation


Transcript_name:ENSMUST00000192128.5 BC020065
Distance:0
GeneID:214742
HGNC/MGI_ID:MGI:2441920
UniProt_ID:A0A0A6YWP7
Gene_name:REST corepressor 3
Gene_symbol:Rcor3
Gene_synonyms:4921514E24Rik C730034D20Rik E130101E15Rik
Gene_source:MGI:2441920



Transcript annotation


Transcript_name:ENSMUST00000192128.5 BC020065
Distance:0
Num_trans:214742
All_trans:MGI:2441920



TATA-Box annotation


Distance to TSS:126
Nearest PromoterID:NM_001290280
Entrez ID:214742
Nearest Unigene:Mm.207457
Nearest Refseq:NM_144814
Nearest Ensembl:ENSMUSG00000037395
Gene Name:REST corepressor 3
Gene Alias:4921514E24Rik|C730034D20Rik|E130101E15Rik
Gene Description:REST corepressor 3
Gene Type:protein-coding
CpG%:0.105
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):