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Difference between revisions of "TSS:Mm 10035.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000057543.2:-161 AK042646:-161
+
|all_trans=MGI:2445118
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 22: Line 22:
 
|nearest_refseq=NR_155503
 
|nearest_refseq=NR_155503
 
|nearest_unigene=Mm.100944
 
|nearest_unigene=Mm.100944
|num_trans=2
+
|num_trans=320952
 
|species=mouse
 
|species=mouse
 
|start=192834557
 
|start=192834557

Latest revision as of 10:36, 26 July 2021

Basic information about the TSS


TSS ID:mm_10035.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:192834557
End:192834558
Strand:-
TSS Score:1
Start of the center position in the TSS region:192834557
End of the center position in the TSS region:192834558



Gene and protein annotation


Transcript_name:ENSMUST00000057543.2 AK042646
Distance:-161
GeneID:320952
HGNC/MGI_ID:MGI:2445118
UniProt_ID:
Gene_name:RIKEN cDNA A730013G03 gene
Gene_symbol:A730013G03Rik
Gene_synonyms:
Gene_source:MGI:2445118



Transcript annotation


Transcript_name:ENSMUST00000057543.2 AK042646
Distance:-161
Num_trans:320952
All_trans:MGI:2445118



TATA-Box annotation


Distance to TSS:655
Nearest PromoterID:NR_155503
Entrez ID:320952
Nearest Unigene:Mm.100944
Nearest Refseq:NR_155503
Nearest Ensembl:
Gene Name:RIKEN cDNA A730013G03 gene
Gene Alias:-
Gene Description:RIKEN cDNA A730013G03 gene
Gene Type:ncRNA
CpG%:0.05
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):