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Difference between revisions of "TSS:Mm 100365.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|MOD2=
 
|MOD2=
|all_trans=AK157869:0 BC035199:-4 Y13274:8 NM_007623:-12 ENSMUST00000026662.7:-71 X62537:-71
+
|all_trans=MGI:88289
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.165
 
|cpg_percent=0.165
Line 23: Line 23:
 
|nearest_refseq=NM_007623
 
|nearest_refseq=NM_007623
 
|nearest_unigene=Mm.14547
 
|nearest_unigene=Mm.14547
|num_trans=6
+
|num_trans=12416
 
|pc=
 
|pc=
 
|species=mouse
 
|species=mouse

Latest revision as of 10:36, 26 July 2021

Basic information about the TSS


TSS ID:mm_100365.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:119023032
End:119023104
Strand:+
TSS Score:1
Start of the center position in the TSS region:119023068
End of the center position in the TSS region:119023069



Gene and protein annotation


Transcript_name:AK157869
Distance:0
GeneID:12416
HGNC/MGI_ID:MGI:88289
UniProt_ID:Q3TZG6
Gene_name:chromobox 2
Gene_symbol:Cbx2
Gene_synonyms:M33
Gene_source:MGI:88289



Transcript annotation


Transcript_name:AK157869
Distance:0
Num_trans:12416
All_trans:MGI:88289



TATA-Box annotation


Distance to TSS:47
Nearest PromoterID:NM_007623
Entrez ID:12416
Nearest Unigene:Mm.14547
Nearest Refseq:NM_007623
Nearest Ensembl:ENSMUSG00000025577
Gene Name:chromobox 2
Gene Alias:M33|MOD2|pc
Gene Description:chromobox 2
Gene Type:protein-coding
CpG%:0.165
GC%:0.781095
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):