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Difference between revisions of "TSS:Mm 10038.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|C130018M11Rik=
 
|C130018M11Rik=
|all_trans=BC060251:-6 NM_198247:-37 ENSMUST00000155579.7:-41 ENSMUST00000125391.1:198
+
|all_trans=MGI:2443496
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 23: Line 23:
 
|nearest_refseq=NM_198247
 
|nearest_refseq=NM_198247
 
|nearest_unigene=Mm.22806
 
|nearest_unigene=Mm.22806
|num_trans=4
+
|num_trans=214791
 
|species=mouse
 
|species=mouse
 
|start=192855683
 
|start=192855683

Latest revision as of 10:37, 26 July 2021

Basic information about the TSS


TSS ID:mm_10038.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:192855683
End:192855715
Strand:-
TSS Score:1
Start of the center position in the TSS region:192855699
End of the center position in the TSS region:192855700



Gene and protein annotation


Transcript_name:BC060251
Distance:-6
GeneID:214791
HGNC/MGI_ID:MGI:2443496
UniProt_ID:
Gene_name:SERTA domain containing 4
Gene_symbol:Sertad4
Gene_synonyms:C130018M11Rik
Gene_source:MGI:2443496



Transcript annotation


Transcript_name:BC060251
Distance:-6
Num_trans:214791
All_trans:MGI:2443496



TATA-Box annotation


Distance to TSS:53
Nearest PromoterID:NM_198247
Entrez ID:214791
Nearest Unigene:Mm.22806
Nearest Refseq:NM_198247
Nearest Ensembl:ENSMUSG00000016262
Gene Name:SERTA domain containing 4
Gene Alias:4833404A09|C130018M11Rik
Gene Description:SERTA domain containing 4
Gene Type:protein-coding
CpG%:0.125
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):