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Difference between revisions of "TSS:Mm 100400.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK037444:50 AK162348:51 ENSMUST00000093902.11:82 ENSMUST00000131035.9:82
+
|all_trans=MGI:1289196
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 23: Line 23:
 
|nearest_refseq=NR_035453
 
|nearest_refseq=NR_035453
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=4
+
|num_trans=672511
 
|species=mouse
 
|species=mouse
 
|start=119393011
 
|start=119393011

Latest revision as of 10:37, 26 July 2021

Basic information about the TSS


TSS ID:mm_100400.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:119393011
End:119393018
Strand:+
TSS Score:1
Start of the center position in the TSS region:119393014
End of the center position in the TSS region:119393015



Gene and protein annotation


Transcript_name:AK037444
Distance:50
GeneID:672511
HGNC/MGI_ID:MGI:1289196
UniProt_ID:Q8CAX5
Gene_name:ring finger protein 213
Gene_symbol:Rnf213
Gene_synonyms:D11Ertd759e
Gene_source:MGI:1289196



Transcript annotation


Transcript_name:AK037444
Distance:50
Num_trans:672511
All_trans:MGI:1289196



TATA-Box annotation


Distance to TSS:2543
Nearest PromoterID:NR_035453
Entrez ID:100316690
Nearest Unigene:
Nearest Refseq:NR_035453
Nearest Ensembl:ENSMUSG00000088015
Gene Name:ring finger protein 213
Gene Alias:mir-1932|mmu-mir-1932
Gene Description:microRNA 1932
Gene Type:ncRNA
CpG%:0.035
GC%:0.507463
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):