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Difference between revisions of "TSS:Mm 100460.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000136662.7:6 AK040288:6 ENSMUST00000148860.1:56
+
|all_trans=MGI:1921620
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 22: Line 22:
 
|nearest_refseq=NR_045312
 
|nearest_refseq=NR_045312
 
|nearest_unigene=Mm.442144
 
|nearest_unigene=Mm.442144
|num_trans=3
+
|num_trans=74370
 
|species=mouse
 
|species=mouse
 
|start=119856237
 
|start=119856237

Latest revision as of 10:38, 26 July 2021

Basic information about the TSS


TSS ID:mm_100460.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:119856237
End:119856253
Strand:+
TSS Score:1
Start of the center position in the TSS region:119856245
End of the center position in the TSS region:119856246



Gene and protein annotation


Transcript_name:ENSMUST00000136662.7 AK040288
Distance:6
GeneID:74370
HGNC/MGI_ID:MGI:1921620
UniProt_ID:F7CN67
Gene_name:regulatory associated protein of MTOR, complex 1
Gene_symbol:Rptor
Gene_synonyms:4932417H02Rik Rap raptor
Gene_source:MGI:1921620



Transcript annotation


Transcript_name:ENSMUST00000136662.7 AK040288
Distance:6
Num_trans:74370
All_trans:MGI:1921620



TATA-Box annotation


Distance to TSS:-21880
Nearest PromoterID:NR_045312
Entrez ID:319454
Nearest Unigene:Mm.442144
Nearest Refseq:NR_045312
Nearest Ensembl:ENSMUSG00000085081
Gene Name:regulatory associated protein of MTOR, complex 1
Gene Alias:A430071A18Rik
Gene Description:regulatory associated protein of MTOR, complex 1, opposite strand
Gene Type:ncRNA
CpG%:0.025
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):