Difference between revisions of "TSS:Mm 100474.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1913676 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001110242 | |nearest_refseq=NM_001110242 | ||
|nearest_unigene=Mm.46699 | |nearest_unigene=Mm.46699 | ||
| − | |num_trans= | + | |num_trans=208501 |
|species=mouse | |species=mouse | ||
|start=120098910 | |start=120098910 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=16(GAGCCTAAAAGG,-,0.00) | |tata_box=16(GAGCCTAAAAGG,-,0.00) | ||
| − | |transcript_name=ENSMUST00000106223.3 ENSMUST00000185558.1 | + | |transcript_name=ENSMUST00000106223.3 ENSMUST00000185558.1 AK010111 AK007756 BC147711 BC147720 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100474.1 | |tss_id=mm_100474.1 | ||
Latest revision as of 10:39, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120098946 |
|---|---|
| End of the center position in the TSS region: | 120098947 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106223.3 ENSMUST00000185558.1 AK010111 AK007756 BC147711 BC147720 |
|---|---|
| Distance: | 0 |
| Num_trans: | 208501 |
| All_trans: | MGI:1913676 |
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NM_001110242 |
| Entrez ID: | 208501 |
| Nearest Unigene: | Mm.46699 |
| Nearest Refseq: | NM_001110242 |
| Nearest Ensembl: | ENSMUSG00000078572 |
| Gene Name: | NADH:ubiquinone oxidoreductase complex assembly factor 8 |
| Gene Alias: | 1810043H04Rik |
| Gene Description: | NADH:ubiquinone oxidoreductase complex assembly factor 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 16(GAGCCTAAAAGG,-,0.00) |
