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Difference between revisions of "TSS:Mm 10049.1"

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Line 2: Line 2:
 
|AI115021=
 
|AI115021=
 
|T3jam=
 
|T3jam=
|all_trans=ENSMUST00000161367.1:0 AY383616:0 BC137605:-15 BC171933:-15 ENSMUST00000160332.7:129 AK161211:130
+
|all_trans=MGI:2441706
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 24: Line 24:
 
|nearest_refseq=NM_153137
 
|nearest_refseq=NM_153137
 
|nearest_unigene=Mm.261259
 
|nearest_unigene=Mm.261259
|num_trans=6
+
|num_trans=215243
 
|species=mouse
 
|species=mouse
 
|start=193197950
 
|start=193197950

Latest revision as of 10:39, 26 July 2021

Basic information about the TSS


TSS ID:mm_10049.1
Species:mouse
Chr:chr1
TSS Classification:no
Start:193197950
End:193198031
Strand:-
TSS Score:1
Start of the center position in the TSS region:193197990
End of the center position in the TSS region:193197991



Gene and protein annotation


Transcript_name:ENSMUST00000161367.1 AY383616
Distance:0
GeneID:215243
HGNC/MGI_ID:MGI:2441706
UniProt_ID:A0A0A6YW19
Gene_name:TRAF3 interacting protein 3
Gene_symbol:Traf3ip3
Gene_synonyms:6030423D04Rik
Gene_source:MGI:2441706



Transcript annotation


Transcript_name:ENSMUST00000161367.1 AY383616
Distance:0
Num_trans:215243
All_trans:MGI:2441706



TATA-Box annotation


Distance to TSS:3555
Nearest PromoterID:NM_153137
Entrez ID:215243
Nearest Unigene:Mm.261259
Nearest Refseq:NM_153137
Nearest Ensembl:ENSMUSG00000037318
Gene Name:TRAF3 interacting protein 3
Gene Alias:6030423D04Rik|AI115021|T3jam
Gene Description:TRAF3 interacting protein 3
Gene Type:protein-coding
CpG%:0.06
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):