Difference between revisions of "TSS:Mm 100579.1"
From referenceTSS
| Line 3: | Line 3: | ||
|R75577= | |R75577= | ||
|Sgn1= | |Sgn1= | ||
| − | |all_trans= | + | |all_trans=MGI:2384801 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_145370 | |nearest_refseq=NM_145370 | ||
|nearest_unigene=Mm.30195 | |nearest_unigene=Mm.30195 | ||
| − | |num_trans= | + | |num_trans=209318 |
|species=mouse | |species=mouse | ||
|start=120784257 | |start=120784257 | ||
| Line 31: | Line 31: | ||
|strand=+ | |strand=+ | ||
|tata_box=-55(GCCCCTTTAAGA,-,0.00),-52(CCTTTAAGAGTG,+,0.00) | |tata_box=-55(GCCCCTTTAAGA,-,0.00),-52(CCTTTAAGAGTG,+,0.00) | ||
| − | |transcript_name=ENSMUST00000132422.1 | + | |transcript_name=ENSMUST00000132422.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100579.1 | |tss_id=mm_100579.1 | ||
Latest revision as of 10:41, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120784264 |
|---|---|
| End of the center position in the TSS region: | 120784265 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000132422.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 209318 |
| All_trans: | MGI:2384801 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001177874 |
| Entrez ID: | 209318 |
| Nearest Unigene: | Mm.30195 |
| Nearest Refseq: | NM_145370 |
| Nearest Ensembl: | ENSMUSG00000025156 |
| Gene Name: | G protein pathway suppressor 1 |
| Gene Alias: | Cops1|Csn1|R75577|Sgn1 |
| Gene Description: | G protein pathway suppressor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -55(GCCCCTTTAAGA,-,0.00),-52(CCTTTAAGAGTG,+,0.00) |
