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Difference between revisions of "TSS:Mm 100589.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Mct4=
 
|Mct4=
|all_trans=AF178954:-78 ENSMUST00000134540.1:-99
+
|all_trans=MGI:1933438
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 23: Line 23:
 
|nearest_refseq=NM_030696
 
|nearest_refseq=NM_030696
 
|nearest_unigene=Mm.28632
 
|nearest_unigene=Mm.28632
|num_trans=2
+
|num_trans=80879
 
|species=mouse
 
|species=mouse
 
|start=120955324
 
|start=120955324

Latest revision as of 10:41, 26 July 2021

Basic information about the TSS


TSS ID:mm_100589.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:120955324
End:120955360
Strand:+
TSS Score:1
Start of the center position in the TSS region:120955342
End of the center position in the TSS region:120955343



Gene and protein annotation


Transcript_name:AF178954
Distance:-78
GeneID:80879
HGNC/MGI_ID:MGI:1933438
UniProt_ID:
Gene_name:solute carrier family 16 (monocarboxylic acid transporters), member 3
Gene_symbol:Slc16a3
Gene_synonyms:MCT3 MCT4 monocarboxylate_transporter_4
Gene_source:MGI:1933438



Transcript annotation


Transcript_name:AF178954
Distance:-78
Num_trans:80879
All_trans:MGI:1933438



TATA-Box annotation


Distance to TSS:6275
Nearest PromoterID:NM_001038653
Entrez ID:80879
Nearest Unigene:Mm.28632
Nearest Refseq:NM_030696
Nearest Ensembl:ENSMUSG00000025161
Gene Name:solute carrier family 16 (monocarboxylic acid transporters), member 3
Gene Alias:Mct3|Mct4
Gene Description:solute carrier family 16 (monocarboxylic acid transporters), member 3
Gene Type:protein-coding
CpG%:0.05
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):