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Difference between revisions of "TSS:Mm 100599.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK154237:0 ENSMUST00000106117.7:-9 ENSMUST00000038831.14:-11 NM_001001333:-11 ENSMUST00000124925.7:261 BC056487:261 ENSMUST00000128913.7:278 ENSMUST00000131009.1:304
+
|all_trans=MGI:3605542
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 22: Line 22:
 
|nearest_refseq=NM_001001333
 
|nearest_refseq=NM_001001333
 
|nearest_unigene=Mm.275130
 
|nearest_unigene=Mm.275130
|num_trans=8
+
|num_trans=238023
 
|species=mouse
 
|species=mouse
 
|start=121204443
 
|start=121204443

Latest revision as of 10:41, 26 July 2021

Basic information about the TSS


TSS ID:mm_100599.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:121204443
End:121204497
Strand:+
TSS Score:1
Start of the center position in the TSS region:121204470
End of the center position in the TSS region:121204471



Gene and protein annotation


Transcript_name:AK154237
Distance:0
GeneID:238023
HGNC/MGI_ID:MGI:3605542
UniProt_ID:
Gene_name:hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
Gene_symbol:Hexdc
Gene_synonyms:
Gene_source:MGI:3605542



Transcript annotation


Transcript_name:AK154237
Distance:0
Num_trans:238023
All_trans:MGI:3605542



TATA-Box annotation


Distance to TSS:37
Nearest PromoterID:NM_001001333
Entrez ID:238023
Nearest Unigene:Mm.275130
Nearest Refseq:NM_001001333
Nearest Ensembl:ENSMUSG00000039307
Gene Name:hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
Gene Alias:BC069960|Hexd
Gene Description:hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
Gene Type:protein-coding
CpG%:0.105
GC%:0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):