Difference between revisions of "TSS:Mm 100677.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1922078 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_027820 | |nearest_refseq=NM_027820 | ||
|nearest_unigene=Mm.72795 | |nearest_unigene=Mm.72795 | ||
| − | |num_trans= | + | |num_trans=193670 |
|species=mouse | |species=mouse | ||
|start=3452262 | |start=3452262 | ||
|start_of_center_position=3452307 | |start_of_center_position=3452307 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000144055.1 BC014812 AK167455 AK149640 AK168904 AK053358 AK034108 AK077638 | + | |transcript_name=ENSMUST00000144055.1 BC014812 AK167455 AK149640 AK168904 AK053358 AK034108 AK077638 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100677.1 | |tss_id=mm_100677.1 | ||
Latest revision as of 10:43, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3452307 |
|---|---|
| End of the center position in the TSS region: | 3452308 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000144055.1 BC014812 AK167455 AK149640 AK168904 AK053358 AK034108 AK077638 |
|---|---|
| Distance: | 0 |
| Num_trans: | 193670 |
| All_trans: | MGI:1922078 |
TATA-Box annotation
| Distance to TSS: | -130 |
|---|---|
| Nearest PromoterID: | NR_028317 |
| Entrez ID: | 71523 |
| Nearest Unigene: | Mm.72795 |
| Nearest Refseq: | NM_027820 |
| Nearest Ensembl: | ENSMUSG00000034587 |
| Gene Name: | ring finger protein 185 |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 8430429K09 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
