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Difference between revisions of "TSS:Mm 100709.1"

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Line 4: Line 4:
 
|ORP-4=
 
|ORP-4=
 
|OSBPL1=
 
|OSBPL1=
|all_trans=ENSMUST00000102950.9:0 ENSMUST00000101632.3:0 BC031794:0 AK044598:0 BC051185:0 BC058602:0 NM_001302631:-5 NM_001302630:-5
+
|all_trans=MGI:1921559
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 26: Line 26:
 
|nearest_refseq=NM_152818
 
|nearest_refseq=NM_152818
 
|nearest_unigene=Mm.61022
 
|nearest_unigene=Mm.61022
|num_trans=8
+
|num_trans=74309
 
|species=mouse
 
|species=mouse
 
|start=3722189
 
|start=3722189

Latest revision as of 10:44, 26 July 2021

Basic information about the TSS


TSS ID:mm_100709.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:3722189
End:3722222
Strand:-
TSS Score:1
Start of the center position in the TSS region:3722205
End of the center position in the TSS region:3722206



Gene and protein annotation


Transcript_name:ENSMUST00000102950.9 ENSMUST00000101632.3 BC031794 AK044598 BC051185 BC058602
Distance:0
GeneID:74309
HGNC/MGI_ID:MGI:1921559
UniProt_ID:Q5QNQ4 Q8K0C7
Gene_name:oxysterol binding protein 2
Gene_symbol:Osbp2
Gene_synonyms:1700095P05Rik C630001G20Rik ORP-4 OSBPL1
Gene_source:MGI:1921559



Transcript annotation


Transcript_name:ENSMUST00000102950.9 ENSMUST00000101632.3 BC031794 AK044598 BC051185 BC058602
Distance:0
Num_trans:74309
All_trans:MGI:1921559



TATA-Box annotation


Distance to TSS:21
Nearest PromoterID:NM_001302630
Entrez ID:74309
Nearest Unigene:Mm.61022
Nearest Refseq:NM_152818
Nearest Ensembl:ENSMUSG00000020435
Gene Name:oxysterol binding protein 2
Gene Alias:1700095P05Rik|C630001G20Rik|Gm244|ORP-4|OSBPL1
Gene Description:oxysterol binding protein 2
Gene Type:protein-coding
CpG%:0.01
GC%:0.631841
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):