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Difference between revisions of "TSS:Mm 10077.1"

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{{TSSDetail
 
{{TSSDetail
 
|Mcp=
 
|Mcp=
|all_trans=AK017702:-80 ENSMUST00000193719.1:-81 ENSMUST00000192405.1:90 ENSMUST00000193094.5:101 AK134226:102 AK004825:-107 ENSMUST00000075451.11:-108 BC028945:108 M23529:-112 ENSMUST00000193829.1:115 NM_001355061:-117 NM_001355060:-117 NM_013499:-117 BC092048:117 ENSMUST00000194111.5:122 ENSMUST00000191775.1:-133 M23446:172 AK160440:329
+
|all_trans=MGI:88513
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 24: Line 24:
 
|nearest_refseq=NM_013499
 
|nearest_refseq=NM_013499
 
|nearest_unigene=Mm.301652
 
|nearest_unigene=Mm.301652
|num_trans=18
+
|num_trans=12946
 
|species=mouse
 
|species=mouse
 
|start=195131444
 
|start=195131444

Latest revision as of 10:45, 26 July 2021

Basic information about the TSS


TSS ID:mm_10077.1
Species:mouse
Chr:chr1
TSS Classification:yes
Start:195131444
End:195131453
Strand:-
TSS Score:1
Start of the center position in the TSS region:195131448
End of the center position in the TSS region:195131449



Gene and protein annotation


Transcript_name:AK017702
Distance:-80
GeneID:12946
HGNC/MGI_ID:MGI:88513
UniProt_ID:
Gene_name:complement component (3b/4b) receptor 1-like
Gene_symbol:Cr1l
Gene_synonyms:Crry mCRY
Gene_source:MGI:88513



Transcript annotation


Transcript_name:AK017702
Distance:-80
Num_trans:12946
All_trans:MGI:88513



TATA-Box annotation


Distance to TSS:121
Nearest PromoterID:NM_013499
Entrez ID:12946
Nearest Unigene:Mm.301652
Nearest Refseq:NM_013499
Nearest Ensembl:ENSMUSG00000016481
Gene Name:complement component (3b/4b) receptor 1-like
Gene Alias:Crry|Mcp|mCRY
Gene Description:complement component (3b/4b) receptor 1-like
Gene Type:protein-coding
CpG%:0.025
GC%:0.497512
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):