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Difference between revisions of "TSS:Mm 100786.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000172305.1:-7 ENSMUST00000164190.7:-76 L27090:107 L27105:107 L22987:113 L22988:113 L22989:113 ENSMUST00000056290.12:117 AK197717:-191 L28176:-198 ENSMUST00000053079.12:-247 AK045998:-247 BC005442:-292 ENSMUST00000109910.8:-418 KY442315:-418 NM_001252252:-426 NM_010898:-426 NM_001252250:-426 NM_001361675:-426 NM_001361677:-426 NM_001361676:-426 NM_001252251:-426 X74671:-430
+
|all_trans=MGI:97307
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 22: Line 22:
 
|nearest_refseq=NM_010898
 
|nearest_refseq=NM_010898
 
|nearest_unigene=Mm.297109
 
|nearest_unigene=Mm.297109
|num_trans=23
+
|num_trans=18016
 
|species=mouse
 
|species=mouse
 
|start=4849101
 
|start=4849101

Latest revision as of 10:46, 26 July 2021

Basic information about the TSS


TSS ID:mm_100786.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:4849101
End:4849118
Strand:-
TSS Score:1
Start of the center position in the TSS region:4849109
End of the center position in the TSS region:4849110



Gene and protein annotation


Transcript_name:ENSMUST00000172305.1
Distance:-7
GeneID:18016
HGNC/MGI_ID:MGI:97307
UniProt_ID:E9Q7I0
Gene_name:neurofibromin 2
Gene_symbol:Nf2
Gene_synonyms:merlin moesin-ezrin-radixin-like_protein schwannomin
Gene_source:MGI:97307



Transcript annotation


Transcript_name:ENSMUST00000172305.1
Distance:-7
Num_trans:18016
All_trans:MGI:97307



TATA-Box annotation


Distance to TSS:434
Nearest PromoterID:NM_001361675
Entrez ID:18016
Nearest Unigene:Mm.297109
Nearest Refseq:NM_010898
Nearest Ensembl:ENSMUSG00000009073
Gene Name:neurofibromin 2
Gene Alias:merlin
Gene Description:neurofibromin 2
Gene Type:protein-coding
CpG%:0.06
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):