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Difference between revisions of "TSS:Mm 100809.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Ewsh=
 
|Ewsh=
|all_trans=AK019460:-278 ENSMUST00000102930.9:-283 AK150345:-284 AK153276:-286 AK147909:-286 AK147103:-295 BC068226:-296 AK151625:-300 AK034755:-302 AK146791:-304 ENSMUST00000093365.11:-307 ENSMUST00000073308.10:-308 ENSMUST00000151847.1:-308 AK049743:-308 X79233:-318 ENSMUST00000063232.6:-337 NM_001362620:-337 NM_007968:-337 NM_001362617:-337 NM_001362612:-337 NM_001362614:-337 NM_001283062:-337 NM_001283061:-337 NM_001362615:-337 NM_001362613:-337 NM_001362616:-337 NM_001362618:-337 NM_001283063:-337 AK046434:-337
+
|all_trans=MGI:99960
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 23: Line 23:
 
|nearest_refseq=NM_007968
 
|nearest_refseq=NM_007968
 
|nearest_unigene=Mm.142822
 
|nearest_unigene=Mm.142822
|num_trans=29
+
|num_trans=14030
 
|species=mouse
 
|species=mouse
 
|start=5098750
 
|start=5098750

Latest revision as of 10:46, 26 July 2021

Basic information about the TSS


TSS ID:mm_100809.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:5098750
End:5098759
Strand:-
TSS Score:1
Start of the center position in the TSS region:5098754
End of the center position in the TSS region:5098755



Gene and protein annotation


Transcript_name:AK019460
Distance:-278
GeneID:14030
HGNC/MGI_ID:MGI:99960
UniProt_ID:
Gene_name:Ewing sarcoma breakpoint region 1
Gene_symbol:Ewsr1
Gene_synonyms:Ews
Gene_source:MGI:99960



Transcript annotation


Transcript_name:AK019460
Distance:-278
Num_trans:14030
All_trans:MGI:99960



TATA-Box annotation


Distance to TSS:341
Nearest PromoterID:NM_001362615
Entrez ID:14030
Nearest Unigene:Mm.142822
Nearest Refseq:NM_007968
Nearest Ensembl:ENSMUSG00000009079
Gene Name:Ewing sarcoma breakpoint region 1
Gene Alias:Ews|Ewsh
Gene Description:Ewing sarcoma breakpoint region 1
Gene Type:protein-coding
CpG%:0.105
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):