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Difference between revisions of "TSS:Mm 100821.1"

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Line 2: Line 2:
 
|Kremen=
 
|Kremen=
 
|Krm1=
 
|Krm1=
|all_trans=BC049771:0 ENSMUST00000020662.14:-15 AB059617:-15 NM_032396:-67 BC082546:-67 AK081707:-72 BC138464:-75 BC138465:-75 AK141321:-78
+
|all_trans=MGI:1933988
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.16
 
|cpg_percent=0.16
Line 24: Line 24:
 
|nearest_refseq=NM_032396
 
|nearest_refseq=NM_032396
 
|nearest_unigene=Mm.209989
 
|nearest_unigene=Mm.209989
|num_trans=9
+
|num_trans=84035
 
|species=mouse
 
|species=mouse
 
|start=5261530
 
|start=5261530

Latest revision as of 10:46, 26 July 2021

Basic information about the TSS


TSS ID:mm_100821.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:5261530
End:5261543
Strand:-
TSS Score:1
Start of the center position in the TSS region:5261536
End of the center position in the TSS region:5261537



Gene and protein annotation


Transcript_name:BC049771
Distance:0
GeneID:84035
HGNC/MGI_ID:MGI:1933988
UniProt_ID:
Gene_name:kringle containing transmembrane protein 1
Gene_symbol:Kremen1
Gene_synonyms:Krm1
Gene_source:MGI:1933988



Transcript annotation


Transcript_name:BC049771
Distance:0
Num_trans:84035
All_trans:MGI:1933988



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NM_032396
Entrez ID:84035
Nearest Unigene:Mm.209989
Nearest Refseq:NM_032396
Nearest Ensembl:ENSMUSG00000020393
Gene Name:kringle containing transmembrane protein 1
Gene Alias:AV002070|Kremen|Krm1
Gene Description:kringle containing transmembrane protein 1
Gene Type:protein-coding
CpG%:0.16
GC%:0.835821
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):