Difference between revisions of "TSS:Mm 100893.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:88257 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_007595 | |nearest_refseq=NM_007595 | ||
|nearest_unigene=Mm.439733 | |nearest_unigene=Mm.439733 | ||
| − | |num_trans= | + | |num_trans=12323 |
|species=mouse | |species=mouse | ||
|start=6065768 | |start=6065768 | ||
|start_of_center_position=6065773 | |start_of_center_position=6065773 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000109813.8 ENSMUST00000090443.9 | + | |transcript_name=ENSMUST00000109813.8 ENSMUST00000090443.9 AK046454 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100893.1 | |tss_id=mm_100893.1 | ||
Latest revision as of 10:48, 26 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6065773 |
|---|---|
| End of the center position in the TSS region: | 6065774 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000109813.8 ENSMUST00000090443.9 AK046454 |
|---|---|
| Distance: | 21 |
| Num_trans: | 12323 |
| All_trans: | MGI:88257 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NM_001174053 |
| Entrez ID: | 12323 |
| Nearest Unigene: | Mm.439733 |
| Nearest Refseq: | NM_007595 |
| Nearest Ensembl: | ENSMUSG00000057897 |
| Gene Name: | calcium/calmodulin-dependent protein kinase II, beta |
| Gene Alias: | CaMKII |
| Gene Description: | calcium/calmodulin-dependent protein kinase II, beta |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
