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Difference between revisions of "TSS:Mm 100901.1"

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{{TSSDetail
 
{{TSSDetail
 
|OTTMUSG00000005107=
 
|OTTMUSG00000005107=
|all_trans=ENSMUST00000117476.1:29 LF226087:-148 MA461664:-148 LF226086:149 MA461663:149 LF198368:-166 MA433945:-166 NR_029471:-265
+
|all_trans=MGI:3650298
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 23: Line 23:
 
|nearest_refseq=NR_029471
 
|nearest_refseq=NR_029471
 
|nearest_unigene=Mm.441799
 
|nearest_unigene=Mm.441799
|num_trans=8
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=6173064
 
|start=6173064

Latest revision as of 10:48, 26 July 2021

Basic information about the TSS


TSS ID:mm_100901.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:6173064
End:6173066
Strand:-
TSS Score:1
Start of the center position in the TSS region:6173065
End of the center position in the TSS region:6173066



Gene and protein annotation


Transcript_name:ENSMUST00000117476.1
Distance:29
GeneID:
HGNC/MGI_ID:MGI:3650298
UniProt_ID:
Gene_name:ribosomal protein S15A, pseudogene 6
Gene_symbol:Rps15a-ps6
Gene_synonyms:Gm11968
Gene_source:MGI:3650298



Transcript annotation


Transcript_name:ENSMUST00000117476.1
Distance:29
Num_trans:
All_trans:MGI:3650298



TATA-Box annotation


Distance to TSS:266
Nearest PromoterID:NR_029471
Entrez ID:100042173
Nearest Unigene:Mm.441799
Nearest Refseq:NR_029471
Nearest Ensembl:
Gene Name:ribosomal protein S15A, pseudogene 6
Gene Alias:Gm11968
Gene Description:ribosomal protein S15A, pseudogene 6
Gene Type:pseudo
CpG%:0.025
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):