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Difference between revisions of "TSS:Mm 100922.1"

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Line 2: Line 2:
 
|H2a.z-2=
 
|H2a.z-2=
 
|H2av=
 
|H2av=
|all_trans=AK021267:0 ENSMUST00000093346.5:8 BC028539:8 AK168110:-44 BC147293:-58 BC147294:-58 BC147741:-58 BC147751:-58 ENSMUST00000109737.8:-73 NM_029938:-73 NM_001347064:-73 AK155105:-75
+
|all_trans=MGI:1924855
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.16
 
|cpg_percent=0.16
Line 24: Line 24:
 
|nearest_refseq=NM_029938
 
|nearest_refseq=NM_029938
 
|nearest_unigene=Mm.27624
 
|nearest_unigene=Mm.27624
|num_trans=12
+
|num_trans=77605
 
|species=mouse
 
|species=mouse
 
|start=6444359
 
|start=6444359

Latest revision as of 10:49, 26 July 2021

Basic information about the TSS


TSS ID:mm_100922.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6444359
End:6444370
Strand:-
TSS Score:1
Start of the center position in the TSS region:6444364
End of the center position in the TSS region:6444365



Gene and protein annotation


Transcript_name:AK021267
Distance:0
GeneID:77605
HGNC/MGI_ID:MGI:1924855
UniProt_ID:
Gene_name:H2A.Z histone variant 2
Gene_symbol:H2az2
Gene_synonyms:C530002L11Rik H2A.Z2 H2afv
Gene_source:MGI:1924855



Transcript annotation


Transcript_name:AK021267
Distance:0
Num_trans:77605
All_trans:MGI:1924855



TATA-Box annotation


Distance to TSS:78
Nearest PromoterID:NM_029938
Entrez ID:77605
Nearest Unigene:Mm.27624
Nearest Refseq:NM_029938
Nearest Ensembl:ENSMUSG00000041126
Gene Name:H2A.Z histone variant 2
Gene Alias:C530002L11Rik|H2A.Z2|H2a.z-2|H2av|Tg(Wnt1-cre)11Rth|Wnt1-Cre|Wnt1::Cre|Wnt1cre
Gene Description:H2A histone family, member V
Gene Type:protein-coding
CpG%:0.16
GC%:0.776119
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):