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Difference between revisions of "TSS:Mm 100935.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000144725.7:-31 BC113755:-36 BC113954:-36 AK042033:-40 AK146251:-63 AK171505:-64 AK159700:-67 AK036461:-74 AK171284:-84 AK152797:-85 AK169450:-85 ENSMUST00000003459.3:-92 ENSMUST00000156878.7:-92 NM_178440:-92 AK088011:-92 AK030825:-92 ENSMUST00000146536.1:-99
+
|all_trans=MGI:1927091
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NM_178440
 
|nearest_refseq=NM_178440
 
|nearest_unigene=Mm.239554
 
|nearest_unigene=Mm.239554
|num_trans=17
+
|num_trans=246177
 
|species=mouse
 
|species=mouse
 
|start=6520864
 
|start=6520864

Latest revision as of 10:49, 26 July 2021

Basic information about the TSS


TSS ID:mm_100935.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6520864
End:6520866
Strand:-
TSS Score:1
Start of the center position in the TSS region:6520865
End of the center position in the TSS region:6520866



Gene and protein annotation


Transcript_name:ENSMUST00000144725.7
Distance:-31
GeneID:246177
HGNC/MGI_ID:MGI:1927091
UniProt_ID:D6RHL4
Gene_name:myosin IG
Gene_symbol:Myo1g
Gene_synonyms:E430002D17Rik
Gene_source:MGI:1927091



Transcript annotation


Transcript_name:ENSMUST00000144725.7
Distance:-31
Num_trans:246177
All_trans:MGI:1927091



TATA-Box annotation


Distance to TSS:93
Nearest PromoterID:NM_178440
Entrez ID:246177
Nearest Unigene:Mm.239554
Nearest Refseq:NM_178440
Nearest Ensembl:ENSMUSG00000020437
Gene Name:myosin IG
Gene Alias:E430002D17Rik
Gene Description:myosin IG
Gene Type:protein-coding
CpG%:0.015
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):