Difference between revisions of "TSS:Mm 100954.1"
From referenceTSS
| Line 6: | Line 6: | ||
|R74877= | |R74877= | ||
|Tb-12= | |Tb-12= | ||
| − | |all_trans= | + | |all_trans=MGI:1100868 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=-226 |
|distance_to_tss=-179 | |distance_to_tss=-179 | ||
|end=6625796 | |end=6625796 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_134011 | |nearest_refseq=NM_134011 | ||
|nearest_unigene=Mm.247761 | |nearest_unigene=Mm.247761 | ||
| − | |num_trans= | + | |num_trans=21379 |
|species=mouse | |species=mouse | ||
|start=6625785 | |start=6625785 | ||
|start_of_center_position=6625790 | |start_of_center_position=6625790 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000131815.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100954.1 | |tss_id=mm_100954.1 | ||
Latest revision as of 10:49, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6625790 |
|---|---|
| End of the center position in the TSS region: | 6625791 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000131815.7 |
|---|---|
| Distance: | -226 |
| Num_trans: | 21379 |
| All_trans: | MGI:1100868 |
TATA-Box annotation
| Distance to TSS: | -179 |
|---|---|
| Nearest PromoterID: | NM_001362716 |
| Entrez ID: | 21379 |
| Nearest Unigene: | Mm.247761 |
| Nearest Refseq: | NM_134011 |
| Nearest Ensembl: | ENSMUSG00000000384 |
| Gene Name: | transforming growth factor beta regulated gene 4 |
| Gene Alias: | 2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12 |
| Gene Description: | transforming growth factor beta regulated gene 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
