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Difference between revisions of "TSS:Mm 100966.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|OTTMUSG00000005127=
 
|OTTMUSG00000005127=
|all_trans=ENSMUST00000142928.1:0 ENSMUST00000127510.8:-10 NR_028586:-13 AK132798:-13
+
|all_trans=MGI:3650695
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 23: Line 23:
 
|nearest_refseq=NR_028586
 
|nearest_refseq=NR_028586
 
|nearest_unigene=Mm.388018
 
|nearest_unigene=Mm.388018
|num_trans=4
+
|num_trans=
 
|species=mouse
 
|species=mouse
 
|start=6660209
 
|start=6660209

Latest revision as of 10:50, 26 July 2021

Basic information about the TSS


TSS ID:mm_100966.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:6660209
End:6660223
Strand:-
TSS Score:1
Start of the center position in the TSS region:6660216
End of the center position in the TSS region:6660217



Gene and protein annotation


Transcript_name:ENSMUST00000142928.1
Distance:0
GeneID:
HGNC/MGI_ID:MGI:3650695
UniProt_ID:
Gene_name:predicted gene 11978
Gene_symbol:Gm11978
Gene_synonyms:100041311
Gene_source:MGI:3650695



Transcript annotation


Transcript_name:ENSMUST00000142928.1
Distance:0
Num_trans:
All_trans:MGI:3650695



TATA-Box annotation


Distance to TSS:20
Nearest PromoterID:NR_028586
Entrez ID:100041311
Nearest Unigene:Mm.388018
Nearest Refseq:NR_028586
Nearest Ensembl:ENSMUSG00000086373
Gene Name:predicted gene 11978
Gene Alias:-
Gene Description:predicted gene 11978
Gene Type:pseudo
CpG%:0.015
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):