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Difference between revisions of "TSS:Mm 101070.1"

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Line 29: Line 29:
 
|start_of_center_position=11462420
 
|start_of_center_position=11462420
 
|strand=-
 
|strand=-
|transcript_name=NM_001185153 NM_015785
+
|transcript_name=NM_015785.2 NM_001185153.1
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=mm_101070.1
 
|tss_id=mm_101070.1

Latest revision as of 10:52, 26 July 2021

Basic information about the TSS


TSS ID:mm_101070.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:11462415
End:11462426
Strand:-
TSS Score:1
Start of the center position in the TSS region:11462420
End of the center position in the TSS region:11462421



Gene and protein annotation


Transcript_name:NM_015785.2 NM_001185153.1
Distance:0
GeneID:53604
HGNC/MGI_ID:MGI:1855701
UniProt_ID:B7ZP49 Q62522
Gene_name:zona pellucida binding protein
Gene_symbol:Zpbp
Gene_synonyms:4930486K01Rik Sp38
Gene_source:MGI:1855701



Transcript annotation


Transcript_name:NM_015785.2 NM_001185153.1
Distance:0
Num_trans:7
All_trans:NM_001185153:0 NM_015785:0 ENSMUST00000020413.3:8 D17569:8 BC139450:28 BC139453:28 BC145628:28



TATA-Box annotation


Distance to TSS:-2
Nearest PromoterID:NM_015785
Entrez ID:53604
Nearest Unigene:Mm.9500
Nearest Refseq:NM_015785
Nearest Ensembl:ENSMUSG00000020193
Gene Name:zona pellucida binding protein
Gene Alias:4930486K01Rik|Iam38|Sp38
Gene Description:zona pellucida binding protein
Gene Type:protein-coding
CpG%:0.035
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):