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Difference between revisions of "TSS:Mm 101098.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC089594:-6 ENSMUST00000066237.9:19 BC060989:-20 AF012881:30 ENSMUST00000178704.7:-64 NM_001190448:-64
+
|all_trans=MGI:94876
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 22: Line 22:
 
|nearest_refseq=NM_016672
 
|nearest_refseq=NM_016672
 
|nearest_unigene=Mm.12906
 
|nearest_unigene=Mm.12906
|num_trans=6
+
|num_trans=13195
 
|species=mouse
 
|species=mouse
 
|start=11898062
 
|start=11898062

Latest revision as of 10:53, 26 July 2021

Basic information about the TSS


TSS ID:mm_101098.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:11898062
End:11898080
Strand:-
TSS Score:1
Start of the center position in the TSS region:11898071
End of the center position in the TSS region:11898072



Gene and protein annotation


Transcript_name:BC089594
Distance:-6
GeneID:13195
HGNC/MGI_ID:MGI:94876
UniProt_ID:
Gene_name:dopa decarboxylase
Gene_symbol:Ddc
Gene_synonyms:Aadc aromatic_L-amino_acid_decarboxylase
Gene_source:MGI:94876



Transcript annotation


Transcript_name:BC089594
Distance:-6
Num_trans:13195
All_trans:MGI:94876



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NM_001190448
Entrez ID:13195
Nearest Unigene:Mm.12906
Nearest Refseq:NM_016672
Nearest Ensembl:ENSMUSG00000020182
Gene Name:dopa decarboxylase
Gene Alias:Aadc
Gene Description:dopa decarboxylase
Gene Type:protein-coding
CpG%:0.02
GC%:0.442786
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):