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Difference between revisions of "TSS:Mm 101142.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK006701:0 ENSMUST00000139973.1:-18 NR_045918:-18
+
|all_trans=MGI:1920557
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 22: Line 22:
 
|nearest_refseq=NR_045918
 
|nearest_refseq=NR_045918
 
|nearest_unigene=Mm.399291
 
|nearest_unigene=Mm.399291
|num_trans=3
+
|num_trans=73307
 
|species=mouse
 
|species=mouse
 
|start=14599194
 
|start=14599194

Latest revision as of 10:54, 26 July 2021

Basic information about the TSS


TSS ID:mm_101142.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:14599194
End:14599207
Strand:-
TSS Score:1
Start of the center position in the TSS region:14599200
End of the center position in the TSS region:14599201



Gene and protein annotation


Transcript_name:AK006701
Distance:0
GeneID:73307
HGNC/MGI_ID:MGI:1920557
UniProt_ID:
Gene_name:RIKEN cDNA 1700046C09 gene
Gene_symbol:1700046C09Rik
Gene_synonyms:
Gene_source:MGI:1920557



Transcript annotation


Transcript_name:AK006701
Distance:0
Num_trans:73307
All_trans:MGI:1920557



TATA-Box annotation


Distance to TSS:24
Nearest PromoterID:NR_045918
Entrez ID:73307
Nearest Unigene:Mm.399291
Nearest Refseq:NR_045918
Nearest Ensembl:ENSMUSG00000085561
Gene Name:RIKEN cDNA 1700046C09 gene
Gene Alias:-
Gene Description:RIKEN cDNA 1700046C09 gene
Gene Type:ncRNA
CpG%:0.035
GC%:0.507463
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):