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Difference between revisions of "TSS:Mm 101252.1"

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Line 4: Line 4:
 
|Hspc159=
 
|Hspc159=
 
|Lgalsla=
 
|Lgalsla=
|all_trans=ENSMUST00000132928.1:0 AK041053:0 AK167557:0 ENSMUST00000047028.8:-3 ENSMUST00000154300.7:-3 BC019131:-4 NM_173752:-55 AK156350:-183 ENSMUST00000144441.7:255
+
|all_trans=MGI:1916114
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.165
 
|cpg_percent=0.165
Line 26: Line 26:
 
|nearest_refseq=NM_173752
 
|nearest_refseq=NM_173752
 
|nearest_unigene=Mm.76694
 
|nearest_unigene=Mm.76694
|num_trans=9
+
|num_trans=216551
 
|species=mouse
 
|species=mouse
 
|start=20831009
 
|start=20831009

Latest revision as of 10:56, 26 July 2021

Basic information about the TSS


TSS ID:mm_101252.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:20831009
End:20831053
Strand:-
TSS Score:1
Start of the center position in the TSS region:20831031
End of the center position in the TSS region:20831032



Gene and protein annotation


Transcript_name:ENSMUST00000132928.1 AK041053 AK167557
Distance:0
GeneID:216551
HGNC/MGI_ID:MGI:1916114
UniProt_ID:
Gene_name:lectin, galactoside binding-like
Gene_symbol:Lgalsl
Gene_synonyms:1110067D22Rik
Gene_source:MGI:1916114



Transcript annotation


Transcript_name:ENSMUST00000132928.1 AK041053 AK167557
Distance:0
Num_trans:216551
All_trans:MGI:1916114



TATA-Box annotation


Distance to TSS:77
Nearest PromoterID:NM_173752
Entrez ID:216551
Nearest Unigene:Mm.76694
Nearest Refseq:NM_173752
Nearest Ensembl:ENSMUSG00000042363
Gene Name:lectin, galactoside binding-like
Gene Alias:1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla
Gene Description:lectin, galactoside binding-like
Gene Type:protein-coding
CpG%:0.165
GC%:0.800995
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):